Sampling considerations for herd-level measurement of faecal Escherichia coli antimicrobial resistance in finisher pigs

Epidemiol Infect. 1999 Jun;122(3):485-96. doi: 10.1017/s0950268899002411.

Abstract

The objective of this study was to determine the most efficient means of sampling faeces of finisher pigs for accurate and precise farm-level estimates of antimicrobial resistance among faecal Escherichia coli. Resistance to tetracycline and gentamicin of 8250 isolates of E. coli from 55 finisher pigs on one farm was measured with a hydrophobic grid membrane filter method. The between-pig, within-pen component of variance in resistance was large (97.5%), while between-pen, within-room and between-room components were small (2.5% and 0%, respectively). Using these resistance data, the abilities of two sampling strategies to estimate prevalence were modelled with a Monte Carlo 'bootstrap' procedure. Compositing faecal samples from several pigs before testing produced unbiased and precise estimates of prevalence and is simpler technically than individual animal testing.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Anti-Bacterial Agents / pharmacology*
  • Drug Resistance, Microbial
  • Escherichia coli / drug effects*
  • Escherichia coli / isolation & purification
  • Escherichia coli Infections / microbiology
  • Escherichia coli Infections / veterinary
  • Feces / microbiology*
  • Female
  • Gentamicins / pharmacology*
  • Male
  • Microbial Sensitivity Tests
  • Random Allocation
  • Specimen Handling / methods
  • Specimen Handling / veterinary
  • Swine
  • Swine Diseases / microbiology
  • Tetracycline / pharmacology*
  • Tetracycline Resistance

Substances

  • Anti-Bacterial Agents
  • Gentamicins
  • Tetracycline