Crystal structure of Escherichia coli UvrB C-terminal domain, and a model for UvrB-uvrC interaction

FEBS Lett. 2000 Jan 14;465(2-3):161-4. doi: 10.1016/s0014-5793(99)01690-7.

Abstract

A crystal structure of the C-terminal domain of Escherichia coli UvrB (UvrB') has been solved to 3.0 A resolution. The domain adopts a helix-loop-helix fold which is stabilised by the packing of hydrophobic side-chains between helices. From the UvrB' fold, a model for a domain of UvrC (UvrC') that has high sequence homology with UvrB' has been made. In the crystal, a dimerisation of UvrB domains is seen involving specific hydrophobic and salt bridge interactions between residues in and close to the loop region of the domain. It is proposed that a homologous mode of interaction may occur between UvrB and UvrC. This interaction is likely to be flexible, potentially spanning > 50 A.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / metabolism*
  • Crystallography, X-Ray
  • DNA Helicases*
  • Dimerization
  • Endodeoxyribonucleases*
  • Escherichia coli / chemistry*
  • Escherichia coli Proteins*
  • Helix-Loop-Helix Motifs
  • Models, Molecular
  • Molecular Sequence Data
  • Protein Binding
  • Protein Conformation
  • Sequence Homology, Amino Acid

Substances

  • Bacterial Proteins
  • Escherichia coli Proteins
  • UvrB protein, E coli
  • Endodeoxyribonucleases
  • UvrC protein, E coli
  • DNA Helicases