DPB1*8501, a novel DPB1 variant in the US Black population

Tissue Antigens. 2000 Sep;56(3):282-4. doi: 10.1034/j.1399-0039.2000.560313.x.

Abstract

We describe a new DPB1 allele, DPB1*8501, which was identified by sequencing-based typing (SBT) in the UCLA exchange. DPB1*8501 is similar to DPB1*2701 with a difference at position 272, (G to A). This difference leads to an amino-acid change of codon 91 from arginine (CGC) to histidine (CAC). Until now this position has been considered conserved. This substitution is located at the 3' site of exon 2, and may interfere with typing strategies using primers or probes located in this region.

MeSH terms

  • Alleles*
  • Amino Acid Sequence
  • Base Sequence
  • Black People / genetics*
  • Black or African American
  • HLA-D Antigens / genetics*
  • HLA-DP Antigens / genetics*
  • HLA-DP beta-Chains
  • Histocompatibility Testing
  • Humans
  • Molecular Sequence Data
  • Polymorphism, Single Nucleotide*
  • Sequence Alignment
  • United States

Substances

  • HLA-D Antigens
  • HLA-DP Antigens
  • HLA-DP beta-Chains
  • HLA-DPB1 antigen
  • HLA-DPB1*85:01 antigen

Associated data

  • GENBANK/AF184168
  • GENBANK/AF211979