SIVcpz from a naturally infected Cameroonian chimpanzee: biological and genetic comparison with HIV-1 N

J Med Primatol. 2000 Aug;29(3-4):166-72. doi: 10.1034/j.1600-0684.2000.290310.x.

Abstract

Thus far, simian immunodeficiency virus from chimpanzees (SIVcpz) genomes have been characterized as Pan troglodytes troglodytes and show a strong relation with human immunodeficiency virus (HIV)-1 N in their env genes. We fully characterized another SIVcpz from P. t. troglodytes. This chimpanzee (Cam5) was, as was also the host of SIVcpz-cam3, wild born in Cameroon, a region where all three groups of HIV-1 (M, N and O) co-occur. In contrast to other SIVcpz, SIVcpz-cam5 was isolated immediately after the rescue of the animal. Our data demonstrate that SIVcpz-cam5, like SIVcpz-cam3, grows easily on human peripheral blood mononuclear cells (PBMCs) and uses CCR5 as a co-receptor similar to HIV-1 N YBF30. Phylogenetic analysis based on the entire env gene shows that SIVcpz-cam5 falls into the same unique subcluster as HIV-1 N YBF30, SIVcpz-cam3 and SIVcpz-US. A phylogenetic relationship was also found with the vif gene of HIV-1 N. This study provides proof that HIV-1 N related viruses circulate in wild P. t. troglodytes.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Cameroon
  • Consensus Sequence
  • DNA, Viral / genetics
  • Gene Products, env / chemistry
  • Gene Products, env / genetics
  • Genes, env*
  • HIV-1 / classification
  • HIV-1 / genetics
  • HIV-1 / physiology*
  • Humans
  • Lymphocytes / immunology
  • Lymphocytes / virology
  • Molecular Sequence Data
  • Pan troglodytes
  • Phylogeny*
  • Polymerase Chain Reaction
  • Receptors, HIV / physiology
  • Sequence Alignment
  • Sequence Homology, Amino Acid
  • Simian Acquired Immunodeficiency Syndrome / blood
  • Simian Acquired Immunodeficiency Syndrome / immunology
  • Simian Acquired Immunodeficiency Syndrome / virology*
  • Simian Immunodeficiency Virus / classification
  • Simian Immunodeficiency Virus / genetics
  • Simian Immunodeficiency Virus / physiology*

Substances

  • DNA, Viral
  • Gene Products, env
  • Receptors, HIV