The Bacillus subtilis RNase P holoenzyme contains two RNase P RNA and two RNase P protein subunits

RNA. 2001 Feb;7(2):233-41. doi: 10.1017/s1355838201001352.

Abstract

Ribonuclease P (RNase P) catalyzes the 5' maturation of precursor tRNA transcripts and, in bacteria, is composed of a catalytic RNA and a protein. We investigated the oligomerization state and the shape of the RNA alone and the holoenzyme of Bacillus subtilis RNase P in the absence of substrate by synchrotron small-angle X-ray scattering and affinity retention. The B. subtilis RNase P RNA alone is a monomer; however, the scattering profile changes upon the addition of monovalent ions, possibly suggesting different interdomain angles. To our surprise, the X-ray scattering data combined with the affinity retention results indicate that the holoenzyme contains two RNase P RNA and two RNase P protein molecules. We propose a structural model of the holoenzyme with a symmetrical arrangement of the two RNA subunits, consistent with the X-ray scattering results. This (P RNA)2(P protein)2 complex likely binds substrate differently than the conventional (P RNA)1(P protein)1 complex; therefore, the function of the B. subtilis RNase P holoenzyme may be more diverse than previously thought. These revisions to our knowledge of the RNase P holoenzyme suggest a more versatile role for proteins in ribonucleoprotein complexes.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Avidin / chemistry
  • Bacillus subtilis / enzymology*
  • Biotin / chemistry
  • Chromatography, Gel
  • Endoribonucleases / chemistry
  • Endoribonucleases / genetics*
  • Holoenzymes / chemistry
  • Holoenzymes / genetics
  • Models, Molecular
  • RNA Precursors / chemistry
  • RNA Precursors / genetics*
  • RNA Processing, Post-Transcriptional
  • RNA, Bacterial / chemistry
  • RNA, Bacterial / genetics*
  • RNA, Catalytic / chemistry
  • RNA, Catalytic / genetics*
  • RNA, Catalytic / metabolism
  • Ribonuclease P
  • Substrate Specificity

Substances

  • Holoenzymes
  • RNA Precursors
  • RNA, Bacterial
  • RNA, Catalytic
  • Avidin
  • Biotin
  • Endoribonucleases
  • Ribonuclease P