Isolation of a novel human lung-specific gene, LUNX, a potential molecular marker for detection of micrometastasis in non-small-cell lung cancer

Int J Cancer. 2001 Feb 15;91(4):433-7. doi: 10.1002/1097-0215(200002)9999:9999<::aid-ijc1059>3.0.co;2-b.

Abstract

We have isolated a novel human lung-specific gene, LUNX (lung-specific X protein), by differential-display mRNA analysis. The full-length cDNA contained 1,015 nucleotides including an open reading frame of 768 nucleotides encoding 256 amino acids. We localized the gene to chromosomal region 20p11.1-q12 by radiation hybrid mapping. Using an RT-PCR assay specific for LUNX mRNA, 35 non-small-cell lung-cancer (NSCLC) tumors and 0 of 16 normal lymph nodes were positive. Furthermore, LUNX mRNA expression was enhanced in 26 (84%) of 31 NSCLC tumors vs. corresponding cancer-free lung tissues by semi-quantitative analyses with multiplex RT-PCR. We assessed the possibility of LUNX mRNA as a molecular marker for detection of micrometastasis in dissected lymph nodes obtained from 20 patients with NSCLC tumors. LUNX mRNA was detected in 16 (80%) of 20 histologically positive lymph nodes and 21 (25%) of 84 histologically negative lymph nodes. Comparative analyses of the conventional histological examination and the RT-PCR detection assay for LUNX mRNA showed that the detection rate of metastases in lymph nodes by the RT-PCR assay was higher in 12 and consistent in 6 of the total 20 NSCLC patients. We demonstrate that the LUNX RT-PCR assay is a potential diagnostic method for detection of micrometastases in lymph nodes of NSCLC patients.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Base Sequence
  • Biomarkers, Tumor
  • Blotting, Northern
  • Carcinoma, Non-Small-Cell Lung / genetics*
  • Carcinoma, Non-Small-Cell Lung / metabolism*
  • Chromosomes, Human, Pair 20
  • Cloning, Molecular
  • DNA, Complementary / metabolism
  • Gene Expression Profiling
  • Glycoproteins
  • Humans
  • Lung Neoplasms / genetics*
  • Lung Neoplasms / metabolism*
  • Lymph Nodes / metabolism
  • Lymphatic Metastasis
  • Molecular Sequence Data
  • Neoplasm Metastasis
  • Open Reading Frames
  • Phosphoproteins
  • Protein Biosynthesis*
  • Proteins / genetics*
  • RNA, Messenger / metabolism
  • Radiation Hybrid Mapping
  • Reverse Transcriptase Polymerase Chain Reaction
  • Tissue Distribution

Substances

  • BPIFA1 protein, human
  • Biomarkers, Tumor
  • DNA, Complementary
  • Glycoproteins
  • Phosphoproteins
  • Proteins
  • RNA, Messenger

Associated data

  • GENBANK/AB024937