Synergism of Xist RNA, DNA methylation, and histone hypoacetylation in maintaining X chromosome inactivation

J Cell Biol. 2001 May 14;153(4):773-84. doi: 10.1083/jcb.153.4.773.

Abstract

Xist RNA expression, methylation of CpG islands, and hypoacetylation of histone H4 are distinguishing features of inactive X chromatin. Here, we show that these silencing mechanisms act synergistically to maintain the inactive state. Xist RNA has been shown to be essential for initiation of X inactivation, but not required for maintenance. We have developed a system in which the reactivation frequency of individual X-linked genes can be assessed quantitatively. Using a conditional mutant Xist allele, we provide direct evidence for that loss of Xist RNA destabilizes the inactive state in somatic cells, leading to an increased reactivation frequency of an X-linked GFP transgene and of the endogenous hypoxanthine phosphoribosyl transferase (Hprt) gene in mouse embryonic fibroblasts. Demethylation of DNA, using 5-azadC or by introducing a mutation in Dnmt1, and inhibition of histone hypoacetylation using trichostatin A further increases reactivation in Xist mutant fibroblasts, indicating a synergistic interaction of X chromosome silencing mechanisms.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Acetylation
  • Animals
  • DNA Methylation*
  • DNA Replication / physiology
  • Dosage Compensation, Genetic*
  • Female
  • Fetus / cytology
  • Fibroblasts / physiology
  • Gene Deletion
  • Gene Silencing / physiology
  • Genes, Reporter
  • Green Fluorescent Proteins
  • Histone Deacetylases / metabolism
  • Histones / metabolism*
  • Hypoxanthine Phosphoribosyltransferase / genetics
  • Hypoxanthine Phosphoribosyltransferase / metabolism
  • Indicators and Reagents / metabolism
  • Luminescent Proteins / genetics
  • Mice
  • Mice, Transgenic
  • RNA / physiology
  • RNA, Long Noncoding
  • RNA, Untranslated / genetics*
  • Transcription Factors / genetics*

Substances

  • Histones
  • Indicators and Reagents
  • Luminescent Proteins
  • RNA, Long Noncoding
  • RNA, Untranslated
  • Transcription Factors
  • XIST non-coding RNA
  • Green Fluorescent Proteins
  • RNA
  • Hypoxanthine Phosphoribosyltransferase
  • Histone Deacetylases