A novel strategy by the action of ricin that connects phenotype and genotype without loss of the diversity of libraries

J Am Chem Soc. 2002 Jan 30;124(4):538-43. doi: 10.1021/ja011885x.

Abstract

We present a novel strategy for connection of phenotype and genotype in vitro that can be used for the selection of functional proteins even at room temperature. The strategy involves generation of a stable complex between a ribosome, an mRNA, and its translated protein, without removal of the termination codon, as a result of the action of the ricin A chain during translation. We demonstrate the potential selection capacity of this novel strategy by isolating such complexes that contain newly synthesized streptavidin and glutathione-S-transferase (GST) using appropriate ligands. The technique requires no transfection, no chemical synthesis, no ligation, and no removal of the termination codon. Thus our novel "Ribosome-Inactivation Display System (RIDS)" should provide, without loss of the pool population, a reliable, simple, and robust selection system for in vitro evolution of the properties of proteins in a predictable direction by a combination of randomization and appropriate selection strategies.

MeSH terms

  • Gene Expression Profiling / methods*
  • Glutathione Transferase* / biosynthesis
  • Glutathione Transferase* / genetics
  • Peptide Library
  • Protein Biosynthesis
  • Proteins / genetics
  • Proteins / physiology*
  • RNA, Messenger / chemistry
  • RNA, Messenger / genetics*
  • Ribosomes / chemistry
  • Ribosomes / genetics*
  • Ricin / chemistry
  • Ricin / metabolism*
  • Streptavidin / biosynthesis
  • Streptavidin / genetics

Substances

  • Peptide Library
  • Proteins
  • RNA, Messenger
  • Ricin
  • Streptavidin
  • Glutathione Transferase