KAP-2, a protein that binds to the H-box in a bean chalcone synthase promoter, is a novel plant transcription factor with sequence identity to the large subunit of human Ku autoantigen

Plant Mol Biol. 2002 Jul;49(5):503-14. doi: 10.1023/a:1015505316379.

Abstract

The KAP-2 protein that binds to the H-box (CCTACC) element in the bean CHS15 chalcone synthase promoter was purified, and internal peptide sequence used to design primers leading to the cloning of KAP-2 from bean (Phaseolus vulgaris) and barrel medic (Medicago truncatula). KAP-2 shares sequence similarity to the large subunit of mammalian Ku autoantigen, a protein proposed to be involved in control of DNA recombination and transcription. KAP-2 sequences were present in genomic DNA from a range of legumes, and a related protein is found in Arabidopsis thaliana. Recombinant KAP-2 expressed in insect cells showed the same binding specificity for the CHS15 H-box as the protein purified from bean cell extracts. In vitro transcription assays confirmed that KAP-2 stimulates transcription from a promoter harboring the H-box cis element.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acyltransferases / genetics*
  • Acyltransferases / metabolism
  • Amino Acid Sequence
  • Animals
  • Antigens, Nuclear*
  • Base Sequence
  • Binding Sites / genetics
  • Cell Line
  • DNA Helicases*
  • DNA, Complementary / chemistry
  • DNA, Complementary / genetics
  • DNA, Complementary / isolation & purification
  • DNA, Plant / genetics
  • DNA-Binding Proteins / genetics*
  • Fabaceae / enzymology*
  • Fabaceae / genetics
  • Fabaceae / microbiology
  • Gene Expression Regulation
  • Humans
  • Ku Autoantigen
  • Medicago / genetics
  • Medicago / microbiology
  • Molecular Sequence Data
  • Nuclear Proteins / genetics*
  • Oligonucleotides / genetics
  • Oligonucleotides / metabolism
  • Phaseolus / enzymology
  • Phaseolus / genetics
  • Phaseolus / microbiology
  • Plant Proteins / genetics*
  • Plant Proteins / metabolism
  • Promoter Regions, Genetic / genetics*
  • Protein Binding
  • Recombinant Fusion Proteins / metabolism
  • Sequence Alignment
  • Sequence Analysis, DNA
  • Sequence Analysis, Protein
  • Sequence Homology, Amino Acid
  • Sinorhizobium meliloti / growth & development
  • Spodoptera / cytology
  • Spodoptera / genetics
  • Transcription Factors / genetics*
  • Transcription Factors / metabolism
  • Transcription, Genetic / genetics

Substances

  • Antigens, Nuclear
  • DNA, Complementary
  • DNA, Plant
  • DNA-Binding Proteins
  • Nuclear Proteins
  • Oligonucleotides
  • Plant Proteins
  • Recombinant Fusion Proteins
  • Transcription Factors
  • Acyltransferases
  • flavanone synthetase
  • DNA Helicases
  • XRCC5 protein, human
  • Xrcc6 protein, human
  • Ku Autoantigen

Associated data

  • GENBANK/AF293343
  • GENBANK/AF293344