Toward RNase inhibitors: thermodynamics of 2'-CMP/RNase-A binding in multi-ion buffer

Biochem Pharmacol. 2002 Jun 1;63(11):1937-9. doi: 10.1016/s0006-2952(02)00977-2.

Abstract

Certain ribonucleases (RNases), such as eosinophil-derived neurotoxin, are associated with pathological conditions (e.g. asthma and inflammatory bowel disease) and can even be overtly cyto(neuro)toxic. It has been proposed that small-molecule inhibitors should have therapeutic utility. We used isothermal titration microcalorimetry to characterize reversible inhibitor cytidine 2'-monophosphate (2'-CMP) binding to RNase-A in a multi-ion buffer at 37 degrees as a representative system. The estimated parameters were: K(d)=13.9 microM; DeltaG degrees =-6.90 kcal/mol; DeltaH degrees =-15.7 kcal/mol; and DeltaS degrees =-0.028 kcal/mol-K ('enthalpy-driven' interaction). These data should assist drug design of small-molecule inhibitors of homologous RNase catalytic domains.

MeSH terms

  • Animals
  • Binding Sites
  • Buffers
  • Cattle
  • Cytidine Monophosphate / pharmacology*
  • Enzyme Inhibitors / pharmacology*
  • Metals / metabolism
  • Ribonuclease, Pancreatic / antagonists & inhibitors*
  • Ribonuclease, Pancreatic / metabolism
  • Thermodynamics

Substances

  • Buffers
  • Enzyme Inhibitors
  • Metals
  • Ribonuclease, Pancreatic
  • Cytidine Monophosphate