Universal primers for the PCR-mediated amplification of DNA 1: a satellite-like molecule associated with begomovirus-DNA beta complexes

Mol Biotechnol. 2003 Jan;23(1):83-6. doi: 10.1385/MB:23:1:83.

Abstract

DNA 1 is a single-stranded DNA molecule of approximately 1370 nucleotides. It is associated with monopartite geminiviruses of the genus Begomovirus, which require a DNA beta component for symptomatic infection. The DNA 1 molecule requires the helper begomovirus for movement in plants, but is capable of self-replication. We designed two abutting primer pairs (DNA101/DNA102 and UN101/UN102) to conserved sequences of DNA 1. This allowed polymerase chain reaction-mediated amplification of the full-length molecule from total nucleic acid extracts produced from various host plants from geographically distinct, worldwide locations. These primers are useful both as diagnostic probes and for producing full-length infectious clones for in planta studies.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Ageratum / virology
  • Base Sequence
  • DNA Primers*
  • DNA, Satellite / genetics*
  • DNA, Viral / genetics*
  • Geminiviridae / genetics*
  • Gossypium / virology
  • Molecular Sequence Data
  • Nucleic Acid Amplification Techniques / methods
  • Polymerase Chain Reaction / methods*
  • Solanum lycopersicum / virology

Substances

  • DNA Primers
  • DNA, Satellite
  • DNA, Viral