Distribution of human group a rotavirus VP7 and VP4 types circulating in Seoul, Korea between 1998 and 2000

J Med Virol. 2003 Jun;70(2):324-8. doi: 10.1002/jmv.10398.

Abstract

Three hundred forty-eight fecal specimens collected from young children with acute diarrhea in Seoul, Korea between January 1998 and February 2000 were examined for G and P types. Of these, 205 samples (59%) were confirmed as group A rotavirus by ELISA for the detection of VP6 antigen. Confirmed rotavirus isolates were characterized using G serotyping ELISA and RT-PCR methodologies for G and P genotyping of the outer capsid proteins VP7 and VP4, respectively. Serotyping of the outer capsid protein, VP7, revealed G4 as the dominant circulating serotype (41%) followed by G1 (28%) and quite a high incidence of mixed infection (14%). Genotyping of the VP4 protein was carried out on 55 of the rotavirus isolates with the dominant type being P[8] (46%). Of interest were a number of unusual G and P type combinations detected in Korea for the first time, especially the P[4] genotype associated with non-G2 serotypes. There were also a number of P[6] isolates identified including one G2P[6] isolate.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antigens, Viral*
  • Capsid Proteins / genetics*
  • Child, Preschool
  • Diarrhea / epidemiology*
  • Diarrhea / virology
  • Enzyme-Linked Immunosorbent Assay
  • Humans
  • Korea / epidemiology
  • Reverse Transcriptase Polymerase Chain Reaction
  • Rotavirus / classification*
  • Rotavirus / genetics
  • Rotavirus Infections / epidemiology*
  • Rotavirus Infections / virology
  • Serotyping

Substances

  • Antigens, Viral
  • Capsid Proteins
  • VP4 protein, Rotavirus
  • VP7 protein, Rotavirus