AliasServer: a web server to handle multiple aliases used to refer to proteins

Florian Iragne; Aurélien Barré; Nicolas Goffard; Antoine De Daruvar

doi:10.1093/bioinformatics/bth241

AliasServer: a web server to handle multiple aliases used to refer to proteins

Bioinformatics. 2004 Sep 22;20(14):2331-2. doi: 10.1093/bioinformatics/bth241. Epub 2004 Apr 1.

Authors

Florian Iragne¹, Aurélien Barré, Nicolas Goffard, Antoine De Daruvar

Affiliation

¹ Centre de Bioinformatique Bordeaux, Université V. Segalen Bordeaux 2, 146 rue Léo Saignat, 33076 Bordeaux Cedex, France.

PMID: 15059813
DOI: 10.1093/bioinformatics/bth241

Abstract

AliasServer provides services that facilitate the assembly of data or datasets that make use of different identifiers for refering to the same protein. This resource relies on a database which contains, for a given organism, a non-redundant list of protein sequences associated with a set of aliases.

Availability: AliasServer is available as an interactive Web server at http://cbi.labri.fr/outils/alias/ and as a web service using a SOAP interface. The complete tool, including sources and data, is available for local installations upon request.

Supplementary information: Technical documentation is available at http://cbi.labri.fr/outils/alias/asdoc.pdf

MeSH terms

Algorithms
Database Management Systems*
Databases, Protein*
Documentation / methods
Information Storage and Retrieval / methods*
Internet*
Natural Language Processing
Proteins / chemistry*
Proteins / classification*
Sequence Alignment / methods
Sequence Analysis, Protein / methods
Software
User-Computer Interface*
Vocabulary, Controlled

Substances

Proteins