Structural basis of dynamic glycine receptor clustering by gephyrin

EMBO J. 2004 Jul 7;23(13):2510-9. doi: 10.1038/sj.emboj.7600256. Epub 2004 Jun 17.

Abstract

Gephyrin is a bi-functional modular protein involved in molybdenum cofactor biosynthesis and in postsynaptic clustering of inhibitory glycine receptors (GlyRs). Here, we show that full-length gephyrin is a trimer and that its proteolysis in vitro causes the spontaneous dimerization of its C-terminal region (gephyrin-E), which binds a GlyR beta-subunit-derived peptide with high and low affinity. The crystal structure of the tetra-domain gephyrin-E in complex with the beta-peptide bound to domain IV indicates how membrane-embedded GlyRs may interact with subsynaptic gephyrin. In vitro, trimeric full-length gephyrin forms a network upon lowering the pH, and this process can be reversed to produce stable full-length dimeric gephyrin. Our data suggest a mechanism by which induced conformational transitions of trimeric gephyrin may generate a reversible postsynaptic scaffold for GlyR recruitment, which allows for dynamic receptor movement in and out of postsynaptic GlyR clusters, and thus for synaptic plasticity.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Binding Sites
  • Carrier Proteins / chemistry
  • Carrier Proteins / drug effects
  • Carrier Proteins / isolation & purification
  • Carrier Proteins / metabolism*
  • Carrier Proteins / ultrastructure
  • Chromatography, Gel
  • Coenzymes / metabolism
  • Crystallography, X-Ray
  • Dimerization
  • Hydrogen-Ion Concentration
  • Hydrolysis
  • Mass Spectrometry
  • Membrane Proteins / chemistry
  • Membrane Proteins / drug effects
  • Membrane Proteins / isolation & purification
  • Membrane Proteins / metabolism*
  • Membrane Proteins / ultrastructure
  • Metalloproteins / metabolism
  • Models, Chemical
  • Models, Molecular
  • Molybdenum Cofactors
  • Peptide Fragments / chemistry
  • Peptide Fragments / genetics
  • Protein Binding
  • Protein Conformation
  • Protein Structure, Tertiary
  • Protein Subunits / metabolism
  • Pteridines / metabolism
  • Rats
  • Receptors, Glycine / chemistry
  • Receptors, Glycine / genetics
  • Receptors, Glycine / metabolism*
  • Solutions
  • Sulfates / chemistry
  • Surface Plasmon Resonance
  • Synapses / metabolism
  • Trypsin / pharmacology

Substances

  • Carrier Proteins
  • Coenzymes
  • Membrane Proteins
  • Metalloproteins
  • Molybdenum Cofactors
  • Peptide Fragments
  • Protein Subunits
  • Pteridines
  • Receptors, Glycine
  • Solutions
  • Sulfates
  • gephyrin
  • molybdenum cofactor
  • Trypsin