Hemoglobin site-mutants reveal dynamical role of interhelical H-bonds in the allosteric pathway: time-resolved UV resonance Raman evidence for intra-dimer coupling

J Mol Biol. 2004 Jul 16;340(4):857-68. doi: 10.1016/j.jmb.2004.05.013.

Abstract

The dynamical effect of eliminating specific tertiary H-bonds in the hemoglobin (Hb) tetramer has been investigated by site-directed mutagenesis and time-resolved absorption and ultraviolet resonance Raman (UVRR) spectroscopy. The Trp alpha 14...Thr alpha 67 and Trp beta 15...Ser beta 72 H-bonds connect the A and E helices in the alpha and beta chains, and are proposed to break in the earliest protein intermediate (Rdeoxy) following photo-deligation of HbCO, along with a second pair of H-bonds involving tyrosine residues. Mutation of the acceptor residues Thr alpha 67 and Ser beta 72 to Val and Ala eliminates the A-E H-bonds, but has been shown to have no significant effect on ligand-binding affinity or cooperativity, or on spectroscopic markers of the T-state quaternary interactions. However, the mutations have profound and unexpected effects on the character of the Rdeoxy intermediate, and on the dynamics of the subsequent steps leading to the T state. Formation of the initial quaternary contact (RT intermediate) is accelerated, by an order of magnitude, but the locking-in of the T state is delayed by a factor of 2. These rate effects are essentially the same for either mutation, or for the double mutation, suggesting that the alpha beta dimer behaves as a mechanically coupled dynamical unit. Further evidence for intra-dimer coupling is provided by the Rdeoxy UVRR spectrum, in which either or both mutations eliminate the tyrosine difference intensity, although only tryptophan H-bonds are directly affected. A possible mechanism for mechanical coupling is outlined, involving transmission of forces through the alpha(1)beta(1) (and alpha(2)beta(2)) interface. The present observations establish that quaternary motions can occur on the approximately 100 ns time-scale. They show also that a full complement of interhelical H-bonds actually slows the initial quaternary motion in Hb, but accelerates the locking in of the T-contacts.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.
  • Research Support, U.S. Gov't, P.H.S.
  • Validation Study

MeSH terms

  • Absorption
  • Allosteric Regulation
  • Amino Acid Substitution*
  • Carboxyhemoglobin / chemistry*
  • Carboxyhemoglobin / metabolism
  • Dimerization
  • Escherichia coli / genetics
  • Genetic Variation
  • Heme / chemistry
  • Hemoglobin A / chemistry
  • Hemoglobin A / genetics*
  • Hemoglobin A / metabolism*
  • Humans
  • Hydrogen Bonding
  • Hydrogen-Ion Concentration
  • Kinetics
  • Ligands
  • Models, Molecular
  • Mutagenesis, Site-Directed
  • Oxygen / metabolism
  • Photolysis
  • Protein Binding
  • Protein Structure, Quaternary
  • Protein Structure, Tertiary*
  • Reference Standards
  • Reproducibility of Results
  • Spectrum Analysis, Raman*
  • Tryptophan / genetics

Substances

  • Ligands
  • Heme
  • Tryptophan
  • Hemoglobin A
  • Carboxyhemoglobin
  • Oxygen