An evolutionarily conserved target motif for immunoglobulin class-switch recombination

Nat Immunol. 2004 Dec;5(12):1275-81. doi: 10.1038/ni1137. Epub 2004 Nov 7.

Abstract

Immunoglobulin H class-switch recombination (CSR) occurs between switch regions and requires transcription and activation-induced cytidine deaminase (AID). Transcription through mammalian switch regions, because of their GC-rich composition, generates stable R-loops, which provide single-stranded DNA substrates for AID. However, we show here that the Xenopus laevis switch region S(mu), which is rich in AT and not prone to form R-loops, can functionally replace a mouse switch region to mediate CSR in vivo. X. laevis S(mu)-mediated CSR occurred mostly in a region of AGCT repeats targeted by the AID-replication protein A complex when transcribed in vitro. We propose that AGCT is a primordial CSR motif that targets AID through a non-R-loop mechanism involving an AID-replication protein A complex.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Animals
  • Base Sequence
  • Conserved Sequence / genetics*
  • Cytidine Deaminase / metabolism
  • DNA / metabolism
  • DNA-Binding Proteins / metabolism
  • Deamination
  • Evolution, Molecular*
  • Hybridomas / immunology
  • Immunoglobulin Class Switching / genetics*
  • Immunoglobulin Class Switching / immunology
  • Immunoglobulin G / biosynthesis
  • Immunoglobulin G / genetics
  • Immunoglobulin G / immunology
  • Immunoglobulin Switch Region / genetics*
  • Mice
  • Molecular Sequence Data
  • Mutagenesis, Site-Directed / genetics
  • Recombination, Genetic / genetics*
  • Replication Protein A
  • Sequence Alignment
  • Spleen / immunology
  • Xenopus laevis / genetics

Substances

  • DNA-Binding Proteins
  • Immunoglobulin G
  • Replication Protein A
  • Rpa1 protein, mouse
  • DNA
  • AICDA (activation-induced cytidine deaminase)
  • Cytidine Deaminase