Structural and biochemical characterization of CIB1 delineates a new family of EF-hand-containing proteins

J Biol Chem. 2005 Mar 4;280(9):8407-15. doi: 10.1074/jbc.M411515200. Epub 2004 Dec 1.

Abstract

CIB1 (CIB) is an EF-hand-containing protein that binds multiple effector proteins, including the platelet alphaIIbbeta3 integrin and several serine/threonine kinases and potentially modulates their function. The crystal structure for Ca(2+)-bound CIB1 has been determined at 2.0 A resolution and reveals a compact alpha-helical protein containing four EF-hands, the last two of which bind calcium ions in the standard fashion seen in many other EF-hand proteins. CIB1 shares high structural similarity with calcineurin B and the neuronal calcium sensor (NCS) family of EF-hand-containing proteins. Most importantly, like calcineurin B and NCS proteins, which possess a large hydrophobic pocket necessary for ligand binding, CIB1 contains a hydrophobic pocket that has been implicated in ligand binding by previous mutational analysis. However, unlike several NCS proteins, Ca(2+)-bound CIB1 is largely monomeric whether bound to a relevant peptide ligand or ligand-free. Differences in structure, oligomeric state, and phylogeny define a new family of CIB1-related proteins that extends from arthropods to humans.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Calcineurin / chemistry
  • Calcium / chemistry
  • Calcium / metabolism
  • Calcium-Binding Proteins / chemistry*
  • Calcium-Binding Proteins / physiology*
  • Chromatography, Gel
  • Crystallography, X-Ray
  • Cytoplasm / metabolism
  • Electrons
  • Escherichia coli / metabolism
  • Humans
  • Ions
  • Ligands
  • Models, Molecular
  • Molecular Sequence Data
  • Multigene Family
  • Neurons / metabolism
  • Peptides / chemistry
  • Phylogeny
  • Platelet Glycoprotein GPIIb-IIIa Complex / chemistry*
  • Protein Binding
  • Protein Conformation
  • Protein Folding
  • Protein Structure, Secondary
  • Protein Structure, Tertiary
  • Sequence Homology, Amino Acid
  • Signal Transduction
  • Ultracentrifugation
  • X-Rays

Substances

  • CIB1 protein, human
  • Calcium-Binding Proteins
  • Ions
  • Ligands
  • Peptides
  • Platelet Glycoprotein GPIIb-IIIa Complex
  • Calcineurin
  • Calcium

Associated data

  • PDB/1XO5