Genes involved in aniline degradation by Delftia acidovorans strain 7N and its distribution in the natural environment

Biosci Biotechnol Biochem. 2004 Dec;68(12):2457-65. doi: 10.1271/bbb.68.2457.

Abstract

Aniline-degraders were isolated from activated sludge and environmental samples and classified into eight phylogenetic groups. Seven groups were classified into Gram-negative bacteria, such as Acidovorax sp., Acinetobacter sp., Delftia sp., Comamonas sp., and Pseudomonas sp., suggesting the possible dominance of Gram-negative aniline-degraders in the environment. Aniline degradative genes were cloned from D. acidovorans strain 7N, and the nucleotide sequence of the 8,039-bp fragment containing eight open reading frames was determined. Their deduced amino acid sequences showed homologies to glutamine synthetase (GS)-like protein, glutamine amidotransferase (GA)-like protein, large and small subunits of aniline dioxygenase, reductase, LysR-type regulator, small ferredoxin-like protein, and catechol 2,3-dioxygenase, suggesting a high similarity of this gene cluster to those in P. putida strain UCC22 and Acinetobacter sp. strain YAA. Polymerase chain reaction (PCR) and sequencing analyses of GS-like protein gene segments of other Gram-negative bacteria suggested that Gram-negative bacteria have aniline degradative gene that can be divided into two distinctive groups.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aniline Compounds / metabolism*
  • Biodegradation, Environmental
  • Cloning, Molecular
  • Delftia acidovorans / genetics*
  • Delftia acidovorans / metabolism
  • Ecosystem
  • Genome, Bacterial
  • Gram-Negative Bacteria / classification
  • Gram-Negative Bacteria / isolation & purification
  • Multigene Family
  • Open Reading Frames
  • Restriction Mapping
  • Sequence Analysis, DNA
  • Sequence Homology, Amino Acid

Substances

  • Aniline Compounds
  • aniline