B*4440: a novel HLA-B allele identified by sequence-specific oligonucleotide hybridization and sequence-specific amplification

Tissue Antigens. 2005 Feb;65(2):195-8. doi: 10.1111/j.1399-0039.2005.00349.x.

Abstract

A novel human leukocyte antigen B (HLA-B) allele, B*4440, is described. The allele was identified in an adult stem cell donor of Caucasian origin. HLA-B*4440 most closely matches to B*4403 differing by a substitution of three nucleotides at codon 44, 45, and 50. Thus, low-resolution HLA typing using sequence-specific oligonucleotide hybridization or amplification using sequence-specific primers gave inconclusive results. DNA sequencing confirmed a variation of codons 44 and 45 (AGG AAG-->AGA GAG) and codon 50 (CCA-->CCG), resulting in an amino acid substitution Lys-->Glu at codon 45.

MeSH terms

  • Adult
  • Alleles
  • Amino Acid Substitution
  • Base Sequence
  • HLA-B Antigens / genetics*
  • Humans
  • Molecular Sequence Data
  • Nucleic Acid Hybridization*
  • Polymerase Chain Reaction
  • Sequence Homology, Nucleic Acid
  • Stem Cells*
  • Tissue Donors*
  • White People

Substances

  • HLA-B Antigens

Associated data

  • GENBANK/AJ784155