Early BrdU-responsive genes constitute a novel class of senescence-associated genes in human cells

Exp Cell Res. 2005 Apr 1;304(2):552-8. doi: 10.1016/j.yexcr.2004.10.036. Epub 2004 Dec 15.

Abstract

We identified genes that immediately respond to 5-bromodeoxyuridine (BrdU) in SUSM-1, an immortal fibroblastic line, with DNA microarray and Northern blot analysis. At least 29 genes were found to alter gene expression greater than twice more or less than controls within 36 h after addition of BrdU. They took several different expression patterns upon addition of BrdU, and the majority showed a significant alteration within 12 h. When compared among SUSM-1, HeLa, and TIG-7 normal human fibroblasts, 19 genes behaved similarly upon addition of BrdU. In addition, 14 genes, 9 of which are novel as regards senescence, behaved similarly in senescent TIG-7 cells. The genes do not seem to have a role in proliferation or cell cycle progression. These results suggest that the early BrdU-responsive genes represent early signs of cellular senescence and can be its new biomarkers.

MeSH terms

  • Bromodeoxyuridine / pharmacology*
  • Cell Line, Transformed
  • Cells, Cultured
  • Cellular Senescence / drug effects
  • Cellular Senescence / genetics*
  • DNA / analysis
  • DNA / genetics
  • Fibroblasts / drug effects*
  • Fibroblasts / metabolism
  • Gene Expression Profiling*
  • Gene Expression Regulation / drug effects
  • Gene Expression Regulation / genetics
  • Genes, Immediate-Early / drug effects*
  • Genes, Immediate-Early / genetics*
  • Genetic Markers / genetics
  • HeLa Cells
  • Humans
  • Oligonucleotide Array Sequence Analysis
  • Time Factors

Substances

  • Genetic Markers
  • DNA
  • Bromodeoxyuridine