Identification of a novel splice variant of human PD-L1 mRNA encoding an isoform-lacking Igv-like domain

Acta Pharmacol Sin. 2005 Apr;26(4):462-8. doi: 10.1111/j.1745-7254.2005.00086.x.

Abstract

Aim: To investigate the expression and regulation of PD-1 ligand 1 (PD-L1) in peripheral blood mononuclear cells (PBMC).

Methods: The cDNA encoding human PD-L1 precursor was cloned from the total RNA extracted from the resting and phorbol dibutyrate plus ionomycin- or phytohemagglutinin-activated PBMC, by reverse transcription polymerase chain reaction (RT-PCR), and independent clones were sequenced and analyzed. The expression and subcellular localization were examined in transiently transfected cells. The PD-L1 gene expression in different PBMC was also analyzed by RT-PCR.

Results: A novel human PD-L1 splice variant was identified from the activated PBMC. It was generated by splicing out exon? encoding an immunoglobulin variable domain (Igv)-like domain but retaining all other exons without a frame-shift. Consequently, the putative translated protein contained all other domains including the transmembrane region except for the Igv-like domain. Furthermore, the conventional isoform was expressed on the plasma surface whereas the novel isoform showed a pattern of intracellular membrane distribution in transiently transfected K562 cells. In addition, the expression pattern of the PD-L1 splice variant was variable in different individuals and in different cellular status.

Conclusion: PD-L1 expression may be regulated at the posttranscriptional level through alternative splicing, and modulation of the PD-L1 isoform expression may influence the outcome of specific immune responses in the peripheral tissues.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Alternative Splicing*
  • Amino Acid Sequence
  • Antigens, CD
  • B7-1 Antigen / biosynthesis
  • B7-1 Antigen / genetics*
  • B7-H1 Antigen
  • Base Sequence
  • Cloning, Molecular
  • Exons
  • Genetic Variation*
  • Humans
  • Immunoglobulin Variable Region / genetics*
  • Isomerism
  • K562 Cells
  • Leukocytes, Mononuclear / metabolism
  • Membrane Glycoproteins / biosynthesis
  • Membrane Glycoproteins / genetics*
  • Molecular Sequence Data
  • Peptides / genetics*
  • RNA, Messenger / biosynthesis
  • RNA, Messenger / genetics
  • Sequence Analysis, DNA
  • Transfection

Substances

  • Antigens, CD
  • B7-1 Antigen
  • B7-H1 Antigen
  • CD274 protein, human
  • Immunoglobulin Variable Region
  • Membrane Glycoproteins
  • Peptides
  • RNA, Messenger