Alpha-beta-dehydro-amino acid residues in the design of peptide structures. Molecular and crystal structures of two folded dehydro peptides

Int J Biol Macromol. 1992 Feb;14(1):23-8. doi: 10.1016/s0141-8130(05)80015-7.

Abstract

The molecular and crystal structures of two N alpha-protected tripeptide amides, containing in the central position the alpha-beta-dehydro-amino acid residue delta Phe (Z-configurational isomer), were determined by X-ray diffraction. While Z-Gly-delta Phez-L-Pro-NH2 is characterized in the crystal state by the presence of a type I beta-bend conformation (at the delta Phez-L-Pro sequence), Z-D-Ala-delta Phez-Gly-NH2 is folded into two consecutive beta-bends (type II' followed by type I), at the D-Ala-delta Phez and delta Phez-Gly sequences, respectively. In both cases the achiral delta Phez residue adopts a set of phi, psi angles typical of the right-handed helical conformation. The delta Phe residue may be exploited to design aromatic peptides with preferred secondary structures.

MeSH terms

  • Amino Acid Sequence
  • Indicators and Reagents
  • Isomerism
  • Models, Molecular
  • Molecular Sequence Data
  • Oligopeptides / chemical synthesis
  • Oligopeptides / chemistry*
  • Phenylalanine / analogs & derivatives*
  • Protein Conformation
  • Software
  • X-Ray Diffraction / methods

Substances

  • Indicators and Reagents
  • Oligopeptides
  • Phenylalanine
  • phenyldehydroalanine