Genome architecture of the human beta-globin locus affects developmental regulation of gene expression

Mol Cell Biol. 2005 Oct;25(20):8765-78. doi: 10.1128/MCB.25.20.8765-8778.2005.

Abstract

To test the role of gene order in globin gene expression, mutant human beta-globin locus yeast artificial chromosome constructs were used, each having one additional globin gene encoding a "marked" transcript (epsilon(m), gamma(m), or beta(m)) integrated at different locations within the locus. When a beta(m)-globin gene was placed between the locus control region (LCR) and the epsilon-globin gene, beta(m)-globin expression dominated primitive and definitive erythropoiesis; only beta(m)-globin mRNA was detected during the fetal and adult definitive stages of erythropoiesis. When an (A)gamma(m)-globin gene was placed at the same location, (A)gamma(m)-globin was expressed during embryonic erythropoiesis and the fetal liver stage of definitive erythropoiesis but was silenced during the adult stage. The downstream wild-type gamma-globin genes were not expressed. When an epsilon(m)-globin gene was placed between the delta- and beta-globin genes, it remained silent during embryonic erythropoiesis; only the LCR-proximal wild-type epsilon-globin gene was expressed. Placement of a beta(m)-globin gene upstream of the (G)gamma-globin gene resulted in expression of beta(m)-globin in embryonic cells and in a significant decrease in expression of the downstream wild-type beta-globin gene. These results indicate that distance from the LCR, an inherent property of spatial gene order, is a major determinant of temporal gene expression during development.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Animals
  • Chromosomes, Artificial, Yeast / genetics
  • Erythropoiesis / genetics
  • Female
  • Fetus / metabolism
  • Gene Expression Regulation, Developmental*
  • Gene Order
  • Gene Silencing
  • Genome, Human*
  • Globins / genetics*
  • Humans
  • Locus Control Region
  • Mice
  • Mice, Inbred C57BL
  • Mice, Transgenic
  • Mutation
  • Pregnancy

Substances

  • Globins