Dependence of enzyme reaction mechanism on protonation state of titratable residues and QM level description: lactate dehydrogenase

Chem Commun (Camb). 2005 Dec 21:(47):5873-5. doi: 10.1039/b510735k. Epub 2005 Oct 14.

Abstract

We have studied the dependence of the chemical reaction mechanism of L-lactate dehydrogenase (LDH) on the protonation state of titratable residues and on the level of the quantum mechanical (QM) description by means of hybrid quantum-mechanical/molecular-mechanical (QM/MM) methods; this methodology has allowed clarification of the timing of the hydride transfer and proton transfer components that hitherto had not been possible to state definitively.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • L-Lactate Dehydrogenase / chemistry*
  • L-Lactate Dehydrogenase / metabolism*
  • Molecular Structure
  • NAD / metabolism
  • Protons
  • Substrate Specificity
  • Titrimetry

Substances

  • Protons
  • NAD
  • L-Lactate Dehydrogenase