High-resolution crystal structure of a truncated ColE7 translocation domain: implications for colicin transport across membranes

J Mol Biol. 2006 Feb 10;356(1):22-31. doi: 10.1016/j.jmb.2005.11.056. Epub 2005 Dec 5.

Abstract

ColE7 is a nuclease-type colicin released from Escherichia coli to kill sensitive bacterial cells by degrading the nucleic acid molecules in their cytoplasm. ColE7 is classified as one of the group A colicins, since the N-terminal translocation domain (T-domain) of the nuclease-type colicins interact with specific membrane-bound or periplasmic Tol proteins during protein import. Here, we show that if the N-terminal tail of ColE7 is deleted, ColE7 (residues 63-576) loses its bactericidal activity against E.coli. Moreover, TolB protein interacts directly with the T-domain of ColE7 (residues 1-316), but not with the N-terminal deleted T-domain (residues 60-316), as detected by co-immunoprecipitation experiments, confirming that the N-terminal tail is required for ColE7 interactions with TolB. The crystal structure of the N-terminal tail deleted ColE7 T-domain was determined by the multi-wavelength anomalous dispersion method at a resolution of 1.7 angstroms. The structure of the ColE7 T-domain superimposes well with the T-domain of ColE3 and TR-domain of ColB, a group A Tol-dependent colicin and a group B TonB-dependent colicin, respectively. The structural resemblance of group A and B colicins implies that the two groups of colicins may share a mechanistic connection during cellular import.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Cell Membrane / chemistry
  • Cell Membrane / metabolism*
  • Cell Proliferation
  • Colicins / chemistry*
  • Colicins / genetics
  • Colicins / metabolism*
  • Conserved Sequence
  • Crystallography, X-Ray
  • Escherichia coli / chemistry*
  • Escherichia coli / cytology
  • Escherichia coli / genetics
  • Escherichia coli Proteins / chemistry*
  • Escherichia coli Proteins / genetics
  • Escherichia coli Proteins / metabolism*
  • Models, Molecular
  • Molecular Sequence Data
  • Periplasmic Proteins / metabolism
  • Protein Binding
  • Protein Structure, Quaternary
  • Protein Structure, Tertiary
  • Protein Transport
  • Sequence Alignment
  • Sequence Homology, Amino Acid
  • Structural Homology, Protein

Substances

  • ColE7 protein, E coli
  • Colicins
  • Escherichia coli Proteins
  • Periplasmic Proteins
  • tolB protein, E coli

Associated data

  • PDB/2AXC