Feast/famine regulatory proteins (FFRPs): Escherichia coli Lrp, AsnC and related archaeal transcription factors

FEMS Microbiol Rev. 2006 Jan;30(1):89-108. doi: 10.1111/j.1574-6976.2005.00005.x.

Abstract

Feast/famine regulatory proteins comprise a diverse family of transcription factors, which have been referred to in various individual identifications, including Escherichia coli leucine-responsive regulatory protein and asparagine synthase C gene product. A full length feast/famine regulatory protein consists of the N-terminal DNA-binding domain and the C-domain, which is involved in dimerization and further assembly, thereby producing, for example, a disc or a chromatin-like cylinder. Various ligands of the size of amino acids bind at the interface between feast/famine regulatory protein dimers, thereby altering their assembly forms. Also, the combination of feast/famine regulatory protein subunits forming the same assembly is altered. In this way, a small number of feast/famine regulatory proteins are able to regulate a large number of genes in response to various environmental changes. Because feast/famine regulatory proteins are shared by archaea and eubacteria, the genome-wide regulation by feast/famine regulatory proteins is traceable back to their common ancestor, being the prototype of highly differentiated transcription regulatory mechanisms found in organisms nowadays.

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Archaeal Proteins* / chemistry
  • Archaeal Proteins* / genetics
  • Archaeal Proteins* / metabolism
  • Bacterial Proteins* / chemistry
  • Bacterial Proteins* / genetics
  • Bacterial Proteins* / metabolism
  • Base Sequence
  • Escherichia coli Proteins* / chemistry
  • Escherichia coli Proteins* / genetics
  • Escherichia coli Proteins* / metabolism
  • Gene Expression Regulation, Archaeal*
  • Gene Expression Regulation, Bacterial*
  • Leucine-Responsive Regulatory Protein* / chemistry
  • Leucine-Responsive Regulatory Protein* / genetics
  • Leucine-Responsive Regulatory Protein* / metabolism
  • Models, Molecular
  • Molecular Sequence Data
  • Transcription Factors* / chemistry
  • Transcription Factors* / genetics
  • Transcription Factors* / metabolism
  • Transcription, Genetic

Substances

  • Archaeal Proteins
  • Bacterial Proteins
  • Escherichia coli Proteins
  • Lrp protein, E coli
  • Transcription Factors
  • Leucine-Responsive Regulatory Protein