Allele-specific detection of C-1562T polymorphism in the matrix metalloproteinase-9 gene: genotyping by MADGE

Clin Biochem. 2006 Jun;39(6):630-2. doi: 10.1016/j.clinbiochem.2006.01.005. Epub 2006 Feb 3.

Abstract

Objectives: The aim was to design a method for genotyping MMP-9 C-1562T gene polymorphism that does not require RFLP PCR or sequencing.

Design and methods: Optimization of tetra-primer ARMS PCR was performed to obtain the highest amount of specific amplification products.

Results: PCR products (436 bp, 296 bp, 220 bp) were visualized on MADGE or agarose gel electrophoresis.

Conclusions: We designed a faster, single-step, economical method which becomes advantageous for high throughput population screening.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alleles*
  • Base Sequence
  • DNA Primers
  • Humans
  • Matrix Metalloproteinase 9 / genetics*
  • Polymorphism, Genetic*

Substances

  • DNA Primers
  • Matrix Metalloproteinase 9