First steps of retinal photoisomerization in proteorhodopsin

Biophys J. 2006 Jul 1;91(1):255-62. doi: 10.1529/biophysj.105.074690. Epub 2006 Apr 7.

Abstract

The early steps (<1 ns) in the photocycle of the detergent solubilized proton pump proteorhodopsin are analyzed by ultrafast spectroscopic techniques. A comparison to the first primary events in reconstituted proteorhodopsin as well as to the well known archaeal proton pump bacteriorhodopsin is given. A dynamic Stokes shift observed in fs-time-resolved fluorescence experiments allows a direct observation of early motions on the excited state potential energy surface. The initial dynamics is dominated by sequentially emerging stretching (<150 fs) and torsional (approximately 300 fs) modes of the retinal. The different protonation states of the primary proton acceptor Asp-97 drastically affect the reaction rate and the overall quantum efficiencies of the isomerization reactions, mainly evidenced for time scales above 1 ps. However, no major influence on the fast time scales (approximately 150 fs) could be seen, indicating that the movement out of the Franck-Condon region is fairly robust to electrostatic changes in the retinal binding pocket. Based on fs-time-resolved absorption and fluorescence spectra, ground and exited state contributions can be disentangled and allow to construct a reaction model that consistently explains pH-dependent effects in solubilized and reconstituted proteorhodopsin.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Isomerism
  • Light
  • Photochemistry / methods
  • Retinaldehyde / chemistry*
  • Retinaldehyde / radiation effects*
  • Rhodopsin / chemistry*
  • Rhodopsin / radiation effects*
  • Rhodopsins, Microbial

Substances

  • Rhodopsins, Microbial
  • proteorhodopsin
  • Rhodopsin
  • Retinaldehyde