The genomic structure of human V beta 6 T cell antigen receptor genes

J Exp Med. 1991 Dec 1;174(6):1537-47. doi: 10.1084/jem.174.6.1537.

Abstract

Six genomic clones were characterized containing members of the human V beta 6 subfamily of T cell antigen receptor genes. There were four major findings. (a) New V beta genes were discovered, including V beta 6.10, V beta 13.4, V beta 13.5, and V beta 5.5. (b) Members of the V beta 13, V beta 6, and V beta 5 subfamilies cluster together in the V beta locus and may have evolved through multiple duplication events of an ancestral cassette containing V beta 13-V beta 6-V beta 5 genes. These V beta subfamilies are used by an estimated one-third of T cells in humans and probably represent a highly useful component of the V beta repertoire. (c) The promoters of V beta 13, V beta 6, and V beta 5 genes contain conserved decamer motifs, but discrete differences were observed between promoters of different V beta subfamilies, raising the question of different transcriptional control depending on V beta subfamily usage. (d) The new V beta 6.10 gene is probably a pseudogene, which may have been inactivated due to retrotransposition of Alu elements into its promoter region, a mutation affecting a highly conserved cysteine residue or mutations of the 3' recombinase signal sequence.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Base Sequence
  • DNA Transposable Elements
  • Humans
  • Molecular Sequence Data
  • Promoter Regions, Genetic
  • Receptors, Antigen, T-Cell, alpha-beta / genetics*
  • Repetitive Sequences, Nucleic Acid

Substances

  • DNA Transposable Elements
  • Receptors, Antigen, T-Cell, alpha-beta

Associated data

  • GENBANK/X61439
  • GENBANK/X61440
  • GENBANK/X61441
  • GENBANK/X61442
  • GENBANK/X61443
  • GENBANK/X61444
  • GENBANK/X61445
  • GENBANK/X61446
  • GENBANK/X61447
  • GENBANK/X61653