Zhouia amylolytica gen. nov., sp. nov., a novel member of the family Flavobacteriaceae isolated from sediment of the South China Sea

Int J Syst Evol Microbiol. 2006 Dec;56(Pt 12):2825-2829. doi: 10.1099/ijs.0.64587-0.

Abstract

Three Gram-negative, non-spore-forming strains were isolated from sediment from the South China Sea, China, and their taxonomic positions were investigated using a polyphasic approach. Strains HN-171(T), HN-172 and HN-181 grew optimally at 30 degrees C, in the presence of 4.5-5.0 NaCl % (w/v) and at pH 7.2-7.4. They contained MK-6 as the predominant respiratory quinone and contained iso-C(15 : 1) G, iso-C(15 : 0), summed feature 4 (iso-C(15 : 0) 2-OH and/or C(16 : 1)omega7c/t) and C(15 : 0) as the major fatty acids. The DNA G+C content of strain HN-171(T) was 34.5 mol%. Phylogenetic analyses based on 16S rRNA gene sequences demonstrated that strain HN-171(T), together with strains HN-172 and HN-181, formed a distinct evolutionary lineage within the family Flavobacteriaceae. The 16S rRNA gene sequences of strains HN-171(T), HN-172 and HN-181 shared 99.8-100 % similarity with each other, and the sequence of strain HN-171(T) exhibited similarity values below 90.2 % with those of other members of the family Flavobacteriaceae. The closest relative of HN-171(T) was Coenonia anatina LMG 14382(T) (90.2 %). On the basis of their phenotypic and phylogenetic properties, the three isolates represent a novel genus and a novel species, for which the name Zhouia amylolytica gen. nov., sp. nov. is proposed. The type strain is HN-171(T) (=CGMCC 1.6114(T)=JCM 14016(T)).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Typing Techniques
  • Base Composition
  • China
  • DNA, Bacterial / analysis
  • DNA, Ribosomal / analysis
  • Flavobacteriaceae / classification*
  • Flavobacteriaceae / genetics
  • Flavobacteriaceae / isolation & purification
  • Flavobacteriaceae / physiology
  • Genes, rRNA
  • Geologic Sediments / microbiology*
  • Molecular Sequence Data
  • Phenotype
  • Phylogeny
  • RNA, Ribosomal, 16S / genetics
  • Seawater / microbiology*
  • Sequence Analysis, DNA

Substances

  • DNA, Bacterial
  • DNA, Ribosomal
  • RNA, Ribosomal, 16S

Associated data

  • GENBANK/DQ423479