Heterogeneity of hepatitis B virus genotype D in Japan

Intervirology. 2007;50(2):150-5. doi: 10.1159/000098241. Epub 2006 Dec 22.

Abstract

Objective: Hepatitis B virus (HBV) genotypes B and C are predominant in Japan. Previously, we reported that approximately 9% of HBV carriers in the Ehime area of western Japan were infected with genotype D (HBV/D) and their sequences closely related. Recently, serum samples from 3 patients with chronic HBV/D infections living in Tokyo and the surrounding area became available for testing. The purpose of this study was to determine whether the HBV/D isolates from these different areas of Japan are closely related.

Methods: Of the 3 Tokyo area patients infected with HBV/D, 2 had chronic hepatitis, and 1 had hemophilia with a history of frequent coagulation factor injections. The complete HBV/D genome sequences of each were determined, and compared with those of subjects from the Ehime area.

Results: All 3 HBV/D sequences had a genomic length of 3,182 bases, and the hepatitis B surface antigen subtype was ayw3. Phylogenetic analysis revealed that the 1 of the HBV/D isolates was closely related to the isolates from Ehime Prefecture, while 1 was similar and 1 was clearly distinct.

Conclusion: Our results indicate that HBV/D infections in Japan are heterogeneous.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Child
  • DNA, Viral / genetics
  • Genome, Viral
  • Genotype
  • Hemophilia A / complications
  • Hepatitis B / epidemiology
  • Hepatitis B / virology*
  • Hepatitis B Surface Antigens / genetics
  • Hepatitis B virus / classification*
  • Hepatitis B virus / genetics*
  • Hepatitis B virus / isolation & purification
  • Hepatitis, Chronic / virology
  • Humans
  • Japan / epidemiology
  • Male
  • Molecular Epidemiology
  • Phylogeny
  • Polymorphism, Genetic*
  • Sequence Analysis, DNA
  • Sequence Homology

Substances

  • DNA, Viral
  • Hepatitis B Surface Antigens