Structural biology of RNA silencing and its functional implications

Cold Spring Harb Symp Quant Biol. 2006:71:81-93. doi: 10.1101/sqb.2006.71.053.

Abstract

We outline structure-function contributions from our laboratories on protein-RNA recognition events that monitor siRNA length, 5 -phosphate and 2-nucleotide 3 overhangs, as well as the architecture of Argonaute, its externally bound siRNA complex, and Argonaute-based models involving guide-strand-mediated mRNA binding, cleavage, and release.

Publication types

  • Research Support, N.I.H., Extramural
  • Review

MeSH terms

  • Bacterial Proteins / chemistry
  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism
  • Humans
  • MicroRNAs / biosynthesis
  • Models, Biological
  • Models, Molecular
  • Peptide Initiation Factors / chemistry
  • Peptide Initiation Factors / genetics
  • Peptide Initiation Factors / metabolism
  • Protein Structure, Tertiary
  • RNA Interference*
  • RNA, Messenger / chemistry
  • RNA, Messenger / genetics
  • RNA, Messenger / metabolism
  • RNA, Small Interfering / chemistry
  • RNA, Small Interfering / genetics
  • RNA, Small Interfering / metabolism
  • Ribonuclease III / metabolism
  • Viral Proteins / chemistry
  • Viral Proteins / genetics
  • Viral Proteins / metabolism

Substances

  • Bacterial Proteins
  • MicroRNAs
  • Peptide Initiation Factors
  • RNA, Messenger
  • RNA, Small Interfering
  • Viral Proteins
  • Ribonuclease III