HLA-B*5701 typing: evaluation of an allele-specific polymerase chain reaction melting assay

Tissue Antigens. 2007 Jul;70(1):58-61. doi: 10.1111/j.1399-0039.2007.00840.x.

Abstract

Inheritance of HLA-B*5701 is a strong predictor of a hypersensitivity reaction to the anti-HIV drug abacavir. The identification of susceptible individuals prior to the institution of abacavir therapy is therefore of clinical importance and has generated demand for a simple and rapid diagnostic test for carriage of HLA-B*5701. In this study, we describe the development of such a method based on allele-specific polymerase chain reaction (AS-PCR) and melting curve analysis. Ninety-six patient samples including 36 HLA-B*5701-positive samples and 60 HLA-B*5701-negative samples were analysed. Compared with sequence-based typing, this method had 100% sensitivity and specificity for the HLA-B*5701 allele. In conclusion, the AS-PCR/melting curve approach minimises post-polymerase chain reaction handling processing and provides an attractive alternative to currently described AS-PCR methods.

Publication types

  • Evaluation Study

MeSH terms

  • Alleles*
  • Anti-HIV Agents / adverse effects
  • Anti-HIV Agents / therapeutic use
  • Base Sequence
  • Biological Assay*
  • Dideoxynucleosides / pharmacology
  • Drug Hypersensitivity / genetics
  • Drug Hypersensitivity / prevention & control
  • Genetic Testing
  • HLA-B Antigens / genetics*
  • Histocompatibility Testing / methods*
  • Hot Temperature*
  • Humans
  • Molecular Sequence Data
  • Polymerase Chain Reaction*
  • Reverse Transcriptase Inhibitors / pharmacology
  • Sensitivity and Specificity

Substances

  • Anti-HIV Agents
  • Dideoxynucleosides
  • HLA-B Antigens
  • HLA-B*57:01 antigen
  • Reverse Transcriptase Inhibitors
  • abacavir