Directional loading and stimulation of PcrA helicase by the replication initiator protein RepD

J Mol Biol. 2007 Aug 10;371(2):336-48. doi: 10.1016/j.jmb.2007.05.050. Epub 2007 May 24.

Abstract

The replication initiator protein RepD recruits the Bacillus PcrA helicase directly onto the (-) strand of the plasmid replication origin oriD. The 5'-phosphate group at the nick is essential for loading, suggesting that it is the RepD covalently linked to the 5'-phosphate group at the nick that loads the helicase onto the oriD. The products of the unwinding reaction were visualised by atomic force microscopy (AFM) and monitored in real time by fluorescence spectroscopy. RepD remains associated with PcrA and stimulates processive directional unwinding of the plasmid at approximately 60 bp s(-1). In the absence of RepD, PcrA retains the ability to bind to a pre-nicked oriD, but engages the 3' end of the nick and translocates 3'-5' along the (+) strand in a poorly processive fashion. Our data provide a unique insight into the recruitment of PcrA-like helicases to DNA-nick sites and the processive translocation of the PcrA motor as a component of the plasmid replication apparatus.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism*
  • Base Sequence
  • DNA / genetics
  • DNA / metabolism
  • DNA Helicases / genetics
  • DNA Helicases / metabolism*
  • DNA Replication
  • DNA-Binding Proteins / genetics
  • DNA-Binding Proteins / metabolism*
  • Geobacillus stearothermophilus / enzymology
  • Geobacillus stearothermophilus / genetics
  • Microscopy, Atomic Force
  • Molecular Sequence Data
  • Phosphates / metabolism
  • Plasmids / genetics
  • Plasmids / metabolism
  • Plasmids / ultrastructure
  • Protein Binding
  • Replication Origin / genetics
  • Substrate Specificity
  • Time Factors
  • Trans-Activators / genetics
  • Trans-Activators / metabolism*

Substances

  • Bacterial Proteins
  • DNA-Binding Proteins
  • Phosphates
  • Trans-Activators
  • pcrA protein, Bacteria
  • replication initiator protein
  • DNA
  • RepD helicase
  • DNA Helicases