Electrospray-assisted laser desorption/ionization and tandem mass spectrometry of peptides and proteins

Rapid Commun Mass Spectrom. 2007;21(16):2541-6. doi: 10.1002/rcm.3154.

Abstract

We have constructed an electrospray-assisted laser desorption/ionization (ELDI) source which utilizes a nitrogen laser pulse to desorb intact molecules from matrix-containing sample solution droplets, followed by electrospray ionization (ESI) post-ionization. The ELDI source is coupled to a quadrupole ion trap mass spectrometer and allows sampling under ambient conditions. Preliminary data showed that ELDI produces ESI-like multiply charged peptides and proteins up to 29 kDa carbonic anhydrase and 66 kDa bovine albumin from single-protein solutions, as well as from complex digest mixtures. The generated multiply charged polypeptides enable efficient tandem mass spectrometric (MS/MS)-based peptide sequencing. ELDI-MS/MS of protein digests and small intact proteins was performed both by collisionally activated dissociation (CAD) and by nozzle-skimmer dissociation (NSD). ELDI-MS/MS may be a useful tool for protein sequencing analysis and top-down proteomics study, and may complement matrix-assisted laser desorption/ionization (MALDI)-based measurements.

Publication types

  • Evaluation Study
  • Research Support, N.I.H., Extramural

MeSH terms

  • Equipment Design
  • Equipment Failure Analysis
  • Peptide Mapping / instrumentation*
  • Peptide Mapping / methods
  • Reproducibility of Results
  • Sensitivity and Specificity
  • Sequence Analysis, Protein / methods*
  • Specimen Handling / instrumentation*
  • Specimen Handling / methods
  • Spectrometry, Mass, Electrospray Ionization / instrumentation*
  • Spectrometry, Mass, Electrospray Ionization / methods
  • Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization / instrumentation*
  • Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization / methods
  • Transducers