Chryseobacterium hominis sp. nov., to accommodate clinical isolates biochemically similar to CDC groups II-h and II-c

Int J Syst Evol Microbiol. 2007 Nov;57(Pt 11):2623-2628. doi: 10.1099/ijs.0.65158-0.

Abstract

A collection of eight clinical strains from Belgian hospitals and three clinical strains of the CCUG collection were characterized biochemically as being similar to CDC groups II-h and II-c; the latter differs from group II-h only by positivity for sucrose acidification. These 11 strains were found to cluster according to 16S rRNA gene sequence similarity at a level of >or=99.5%, and on the basis of their tDNA-PCR profile. Based on 16S rRNA gene sequence analysis, this collection of strains was related most closely to Chryseobacterium hispanicum (97.2%), but they differed from the type strain of this species by the following phenotypic characteristics: growth at 37 degrees C, negativity for xylose acidification, positivity for acetate assimilation-alkalinization on Simmons' agar base and absence of flexirubin pigments, and by their tDNA-PCR profile. Strain NF802T showed only 57.8% DNA-DNA relatedness to the type strain of C. hispanicum. Fatty acid composition did not enable differentiation from C. hispanicum. The DNA G+C content of strain NF802T is 36.5 mol%. The name Chryseobacterium hominis sp. nov. is proposed for this taxon, with type strain NF802T (=CCUG 52711T=CIP 109415T).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Typing Techniques
  • Centers for Disease Control and Prevention, U.S.
  • Chryseobacterium / classification*
  • Chryseobacterium / genetics
  • Chryseobacterium / isolation & purification*
  • Chryseobacterium / metabolism
  • DNA, Bacterial / analysis
  • DNA, Ribosomal / analysis
  • Flavobacteriaceae Infections / microbiology*
  • Genes, rRNA
  • Humans
  • Molecular Sequence Data
  • Nucleic Acid Hybridization
  • Phenotype
  • Phylogeny
  • Polymerase Chain Reaction / methods
  • RNA, Ribosomal, 16S / genetics
  • RNA, Transfer / genetics
  • Sequence Analysis, DNA
  • United States

Substances

  • DNA, Bacterial
  • DNA, Ribosomal
  • RNA, Ribosomal, 16S
  • RNA, Transfer

Associated data

  • GENBANK/AM261868
  • GENBANK/AM423079
  • GENBANK/AM423080
  • GENBANK/AM423081
  • GENBANK/AM423082
  • GENBANK/AM423083
  • GENBANK/AM423084
  • GENBANK/AM423085
  • GENBANK/AM423086
  • GENBANK/AM423087
  • GENBANK/AM423088