Real-time PCR for type-specific identification of herpes simplex in clinical samples: evaluation of type-specific results in the context of CNS diseases

J Clin Virol. 2008 Feb;41(2):87-91. doi: 10.1016/j.jcv.2007.10.010. Epub 2007 Nov 26.

Abstract

Background: HSV-1 and HSV-2 cause CNS infections of dissimilar clinico-pathological characteristics with prognostic and therapeutic implications.

Objectives: To validate a type-specific real-time PCR that uses MGB/LNA Taqman probes and to review the virologico-clinical data of 25 eligible patients with non-neonatal CNS infections.

Results: This real-time PCR was evaluated against conventional PCR (26 CSF and 20 quality controls), and LightCycler assay (51 mucocutaneous, 8 CSF and 32 quality controls) and culture/immunofluorescence (75 mucocutaneous) to assess typing with independent methods. Taqman real-time PCR detected 240 HSV genomes per ml CSF, a level appropriate for the management of patients, and provided unambiguous typing for the 104 positive (62 HSV-1 and 42 HSV-2) out the 160 independent clinical samples tested. HSV type diagnosed by Taqman real-time PCR predicted final diagnosis (meningitis versus encephalitis/meningoencephalitis, p<0.001) in 24/25 patients at time of presentation, in contrast to clinical evaluation.

Conclusions: Our real-time PCR, as a sensitive and specific means for type-specific HSV diagnosis, provided rapid prognostic information for patient management.

Publication types

  • Evaluation Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Sequence
  • DNA Probes
  • Encephalitis, Viral / diagnosis*
  • Encephalitis, Viral / virology
  • Herpes Simplex / diagnosis*
  • Herpes Simplex / virology
  • Herpesvirus 1, Human / classification*
  • Herpesvirus 1, Human / genetics
  • Herpesvirus 1, Human / isolation & purification
  • Herpesvirus 2, Human / classification*
  • Herpesvirus 2, Human / genetics
  • Herpesvirus 2, Human / isolation & purification
  • Humans
  • Meningitis, Viral / diagnosis*
  • Meningitis, Viral / virology
  • Molecular Sequence Data
  • Polymerase Chain Reaction / methods*
  • Species Specificity
  • Viral Envelope Proteins / chemistry
  • Viral Envelope Proteins / genetics

Substances

  • DNA Probes
  • Viral Envelope Proteins
  • glycoprotein B, Simplexvirus
  • glycoprotein B, herpes simplex virus type 2