Rapid and simple detection of eight major periodontal pathogens by the loop-mediated isothermal amplification method

FEMS Immunol Med Microbiol. 2008 Aug;53(3):314-21. doi: 10.1111/j.1574-695X.2008.00417.x. Epub 2008 Jun 28.

Abstract

Loop-mediated isothermal amplification (LAMP) was applied to develop a rapid and simple detection system for eight periodontal pathogens: Aggregatibacter (Actinobacillus) actinomycetemcomitans, Campylobacter rectus, Eikenella corrodens, Fusobacterium nucleatum, Porphyromonas gingivalis, Prevotella intermedia, Treponema denticola and Tannerella forsythia. Primers were designed from the 16S ribosomal RNA gene for each pathogen, and the LAMP amplified the targets specifically and efficiently under isothermal condition at 64 degrees C. To simplify the manipulation of LAMP examination, boiled cells and intact cells suspended in phosphate-buffered saline (PBS) were tested as templates besides extracted DNA template. The detection limits were 1-10 cells per tube using extracted DNA template. However, LAMP methods using boiled cells and intact cells required 10-100 and 100-1000 cells per tube, respectively. LAMPs for A. actinomycetemcomitans, P. gingivalis and P. intermedia were then applied to clinical plaque samples, and the method demonstrated equal or higher sensitivity compared with the conventional real-time PCR method. These findings suggest the usefulness of the LAMP method for the rapid and simple microbiological diagnosis of periodontitis, and the possibility of LAMP examination without the DNA extraction step.

Publication types

  • Evaluation Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • DNA Primers / genetics
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / genetics
  • Dental Plaque / microbiology
  • Genes, rRNA / genetics
  • Gram-Negative Anaerobic Bacteria / genetics
  • Gram-Negative Anaerobic Bacteria / isolation & purification*
  • Humans
  • Nucleic Acid Amplification Techniques / methods*
  • Periodontal Diseases / microbiology*
  • RNA, Ribosomal, 16S / genetics
  • Sensitivity and Specificity

Substances

  • DNA Primers
  • DNA, Bacterial
  • DNA, Ribosomal
  • RNA, Ribosomal, 16S