Fine genetic mapping of xa24, a recessive gene for resistance against Xanthomonas oryzae pv. oryzae in rice

Theor Appl Genet. 2008 Dec;118(1):185-91. doi: 10.1007/s00122-008-0888-y. Epub 2008 Sep 16.

Abstract

Bacterial blight, caused by Xanthomonas oryzae pv. oryzae (Xoo), is the most devastating plant bacterial disease worldwide. Different bacterial blight resistance (R) genes confer race-specific resistance to different strains of Xoo. We fine mapped a fully recessive gene, xa24, for bacterial blight resistance to a 71-kb DNA fragment in the long arm of rice chromosome 2 using polymerase chain reaction-based molecular markers. The xa24 gene confers disease resistance at the seedling and adult stages. It mediates resistance to at least the Philippine Xoo races 4, 6 and 10 and Chinese Xoo strains Zhe173, JL691 and KS-1-21. Sequence analysis of the DNA fragment harboring the dominant (susceptible) allele of xa24 suggests that this gene should encode a novel protein that is not homologous to any known R proteins. These results will greatly facilitate the isolation and characterization of xa24. The markers will be convenient tools for marker-assisted selection of xa24 in breeding programs.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alleles
  • Chromosome Mapping*
  • Chromosomes, Plant
  • DNA, Plant / genetics
  • Genes, Plant
  • Genes, Recessive*
  • Genetic Markers
  • Immunity, Innate
  • Oryza / genetics*
  • Oryza / microbiology
  • Plant Diseases / genetics*
  • Plant Diseases / microbiology
  • Sequence Analysis, DNA
  • Xanthomonas / pathogenicity

Substances

  • DNA, Plant
  • Genetic Markers