Functional domains of the bacteriophage P2 scaffolding protein: identification of residues involved in assembly and protease activity

Virology. 2009 Feb 5;384(1):144-50. doi: 10.1016/j.virol.2008.11.016. Epub 2008 Dec 6.

Abstract

Bacteriophage P2 encodes a scaffolding protein, gpO, which is required for correct assembly of P2 procapsids from the gpN major capsid protein. The 284 residue gpO protein also acts as a protease, cleaving itself into an N-terminal fragment, O, that remains in the capsid following maturation. In addition, gpO is presumed to act as the maturation protease for gpN, which is N-terminally processed to N, accompanied by DNA packaging and capsid expansion. The protease activity of gpO resides in the N-terminal half of the protein. We show that gpO is a classical serine protease, with a catalytic triad comprised of Asp 19, His 48 and Ser 107. The C-terminal 90 amino acids of gpO are required and sufficient for capsid assembly. This fragment contains a predicted alpha-helical segment between residues 197 and 257 and exists as a multimer in solution, suggesting that oligomerization is required for scaffolding activity. Correct assembly requires the C-terminal cysteine residue, which is most likely involved in transient gpN interactions. Our results suggest a model for gpO scaffolding action in which the N-terminal half of gpO binds strongly to gpN, while oligomerization of the C-terminal alpha-helical domain of gpO and transient interactions between Cys 284 and gpN lead to capsid assembly.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Bacteriophage P2 / enzymology
  • Bacteriophage P2 / genetics
  • Bacteriophage P2 / metabolism*
  • Capsid
  • Capsid Proteins / genetics
  • Capsid Proteins / metabolism*
  • Chromatography, Gel
  • DNA, Viral / genetics
  • Gene Expression Regulation, Viral
  • Molecular Weight
  • Peptide Hydrolases / metabolism*
  • RNA, Double-Stranded / genetics
  • Serine Endopeptidases / genetics
  • Serine Endopeptidases / metabolism*
  • Viral Structural Proteins / genetics
  • Viral Structural Proteins / metabolism*

Substances

  • Capsid Proteins
  • DNA, Viral
  • RNA, Double-Stranded
  • Viral Structural Proteins
  • Peptide Hydrolases
  • Serine Endopeptidases