Mapping the xanthine C8-region of the adenosine A1 receptor with computer graphics

Eur J Pharmacol. 1991 Apr 25;206(4):315-23. doi: 10.1016/0922-4106(91)90116-y.

Abstract

Substitution at the 8-position of 1,3-dipropylxanthines can lead to very potent and selective adenosine A1 antagonists. The xanthine C8-region was investigated in this study, using CAMM (computer-assisted molecular modeling). This region can be divided into two subregions with a considerable overlap in volume: a phenyl region which binds the flat substituents and a cycloalkyl region which binds the other substituents. The 8-phenyl-substituted derivatives bind with an N9-C8-Cl'-C2' dihedral angle of 220 degrees; this dihedral angle is 330 degrees for the 8-cycloalkyl-substituted derivatives. The lower affinity of C8-substituted 7-methyl-1,3-dipropylxanthines can be explained quantitatively with steric hindrance, which C8-substituents experience from the 7-methyl group in these conformations. The substitution pattern determines the affinity for 8-phenyl-substituted compounds for which the energy cost to reach the dihedral angle of 220 degrees is low, but has little influence otherwise. The affinity of the 8-cycloalkyl-1,3-dipropylxanthines is mainly volume dependent, because of a forbidden area near the cycloalkyl region.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Computer Graphics*
  • Kinetics
  • Models, Chemical
  • Molecular Structure
  • Protein Conformation
  • Purinergic Antagonists*
  • Rats
  • Receptors, Purinergic / chemistry
  • Receptors, Purinergic / metabolism
  • Structure-Activity Relationship
  • Xanthines / chemistry
  • Xanthines / metabolism
  • Xanthines / pharmacology*

Substances

  • Purinergic Antagonists
  • Receptors, Purinergic
  • Xanthines