Differential 14-3-3 affinity capture reveals new downstream targets of phosphatidylinositol 3-kinase signaling

Mol Cell Proteomics. 2009 Nov;8(11):2487-99. doi: 10.1074/mcp.M800544-MCP200. Epub 2009 Aug 1.

Abstract

We devised a strategy of 14-3-3 affinity capture and release, isotope differential (d(0)/d(4)) dimethyl labeling of tryptic digests, and phosphopeptide characterization to identify novel targets of insulin/IGF1/phosphatidylinositol 3-kinase signaling. Notably four known insulin-regulated proteins (PFK-2, PRAS40, AS160, and MYO1C) had high d(0)/d(4) values meaning that they were more highly represented among 14-3-3-binding proteins from insulin-stimulated than unstimulated cells. Among novel candidates, insulin receptor substrate 2, the proapoptotic CCDC6, E3 ubiquitin ligase ZNRF2, and signaling adapter SASH1 were confirmed to bind to 14-3-3s in response to IGF1/phosphatidylinositol 3-kinase signaling. Insulin receptor substrate 2, ZNRF2, and SASH1 were also regulated by phorbol ester via p90RSK, whereas CCDC6 and PRAS40 were not. In contrast, the actin-associated protein vasodilator-stimulated phosphoprotein and lipolysis-stimulated lipoprotein receptor, which had low d(0)/d(4) scores, bound 14-3-3s irrespective of IGF1 and phorbol ester. Phosphorylated Ser(19) of ZNRF2 (RTRAYpS(19)GS), phospho-Ser(90) of SASH1 (RKRRVpS(90)QD), and phospho- Ser(493) of lipolysis-stimulated lipoprotein receptor (RPRARpS(493)LD) provide one of the 14-3-3-binding sites on each of these proteins. Differential 14-3-3 capture provides a powerful approach to defining downstream regulatory mechanisms for specific signaling pathways.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • 14-3-3 Proteins / metabolism*
  • Actins / chemistry
  • Apoptosis
  • Binding Sites
  • Chromatography, Liquid / methods
  • HeLa Cells
  • Humans
  • Mass Spectrometry / methods
  • Models, Biological
  • Peptides / chemistry
  • Phosphatidylinositol 3-Kinases / metabolism*
  • Proteome
  • Proteomics / methods*
  • Signal Transduction
  • Trypsin / chemistry

Substances

  • 14-3-3 Proteins
  • Actins
  • Peptides
  • Proteome
  • Phosphatidylinositol 3-Kinases
  • Trypsin