Repetitive extragenic palindromic PCR for study of Streptococcus mutans diversity and transmission in human populations

J Clin Microbiol. 2010 Feb;48(2):599-602. doi: 10.1128/JCM.01828-09. Epub 2009 Dec 9.

Abstract

Pulsed-field gel electrophoresis (PFGE) is considered the "gold standard" for molecular epidemiological study. Repetitive extragenic palindromic PCR (rep-PCR) is less time-consuming and more suitable for analyzing large numbers of bacterial strains in human populations. PFGE and rep-PCR provide comparable genotyping results for investigating Streptococcus mutans diversity and transmission.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Bacterial Typing Techniques / methods*
  • Child
  • Child, Preschool
  • Cluster Analysis
  • DNA Fingerprinting / methods*
  • Electrophoresis, Gel, Pulsed-Field
  • Female
  • Genotype
  • Humans
  • Infant
  • Male
  • Molecular Epidemiology / methods
  • Polymerase Chain Reaction / methods*
  • Polymorphism, Genetic
  • Streptococcal Infections / microbiology
  • Streptococcal Infections / transmission
  • Streptococcus mutans / classification*
  • Streptococcus mutans / genetics*
  • Streptococcus mutans / isolation & purification