Complete amino acid sequence of an integrin beta subunit (beta 7) identified in leukocytes

J Biol Chem. 1991 Jun 15;266(17):11009-16.

Abstract

The integrins are a large family of heterodimeric cell-surface glycoproteins that play key roles in the adherence of cells to other cells and to extracellular matrix proteins. We have previously reported the identification of a novel integrin beta subunit partial cDNA from leukocytes. We have now determined the complete sequence of this subunit, designated as beta 7, from overlapping clones obtained from a PEER T leukemia cell library and a peripheral T cell library. The beta 7 cDNA contains a single large open reading frame predicted to encode a 798-amino acid protein precursor (signal peptide plus mature protein). The beta 7 protein, like the other beta subunit proteins, is predicted to contain a large extracellular portion, a transmembrane domain, and a cytoplasmic tail. The deduced beta 7 amino acid sequence is 32-46% identical to the six previously sequenced human integrin beta subunits. beta 7 is most similar to the leukocyte integrin common beta subunit (beta 2, CD18). Analysis of variant beta 7 cDNA clones and reverse transcription-polymerase chain reaction products suggest that alternatively spliced beta 7 mRNAs can be generated by the removal of exons that encode most of the cysteine-rich region of the extracellular portion of beta 7. By Northern blot analysis, beta 7 mRNA was detected in T and B cell lines and in macrophage-like cell lines, but not in any of the nonleukocyte cell lines tested. Peripheral T cells and some lymphoma lines express little beta 7 mRNA before stimulation; but after stimulation with phorbol ester, beta 7 mRNA levels increased markedly. Integrin beta 7 is expected to play a role in adhesive interactions of leukocytes.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Base Sequence
  • Cell Line
  • Cloning, Molecular
  • DNA Probes
  • DNA, Neoplasm / genetics
  • DNA, Neoplasm / isolation & purification
  • Gene Library
  • Humans
  • Integrins / genetics*
  • Integrins / isolation & purification
  • Leukemia, T-Cell
  • Macromolecular Substances
  • Molecular Sequence Data
  • Oligonucleotide Probes
  • Polymerase Chain Reaction
  • Restriction Mapping
  • Sequence Homology, Nucleic Acid
  • T-Lymphocytes

Substances

  • DNA Probes
  • DNA, Neoplasm
  • Integrins
  • Macromolecular Substances
  • Oligonucleotide Probes

Associated data

  • GENBANK/M62880
  • GENBANK/M63255
  • GENBANK/M63806
  • GENBANK/M64332
  • GENBANK/M84122
  • GENBANK/M84123
  • GENBANK/M84124
  • GENBANK/M84125
  • GENBANK/M84128
  • GENBANK/S69830