An intrabody based on a llama single-domain antibody targeting the N-terminal alpha-helical multimerization domain of HIV-1 rev prevents viral production

J Biol Chem. 2010 Jul 9;285(28):21768-80. doi: 10.1074/jbc.M110.112490. Epub 2010 Apr 20.

Abstract

The human immunodeficiency virus, type 1 (HIV-1)-encoded Rev protein is essential for the expression of late viral mRNAs. Rev forms a large organized multimeric protein-protein complex on the Rev response element of these viral mRNA species and transports them from the nucleus to the cytoplasm, exploiting the CRM1-mediated cellular machinery. Here we report the selection of a nanobody, derived from a llama heavy-chain only antibody, that efficiently blocks the assembly of Rev multimers. The nanobody inhibits HIV-1 replication in cells and specifically suppresses the Rev-dependent expression of partially spliced and unspliced HIV-1 RNA. In HIV-susceptible cells, this nanobody thus has potential as an effective anti-HIV agent using genetic immunization strategies. Its binding site was mapped to Rev residues Lys-20 and Tyr-23 located in the N-terminal alpha-helical multimerization domain. In the presence of this nanobody, we observed an accumulation of dimeric Rev species, supporting a head-to-head/tail-to-tail molecular model for Rev assembly. The results indicate that the oligomeric assembly of Rev follows an ordered stepwise process and identify a new epitope within Rev that could guide strategies for the development of novel HIV inhibitors.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Active Transport, Cell Nucleus
  • Amino Acid Sequence
  • Animals
  • Anti-HIV Agents / pharmacology
  • Antibodies / chemistry
  • Camelids, New World
  • Dimerization
  • Fluorescence Resonance Energy Transfer
  • Gene Products, rev / chemistry*
  • Gene Products, rev / metabolism
  • HIV Infections / drug therapy*
  • HIV-1 / metabolism*
  • HeLa Cells
  • Humans
  • Lysine / chemistry
  • Molecular Sequence Data
  • Protein Interaction Mapping
  • Protein Structure, Secondary
  • Protein Structure, Tertiary
  • Tyrosine / chemistry

Substances

  • Anti-HIV Agents
  • Antibodies
  • Gene Products, rev
  • Tyrosine
  • Lysine