The occurrence and high diversity of Clostridium difficile genotypes in rivers

Anaerobe. 2010 Aug;16(4):371-5. doi: 10.1016/j.anaerobe.2010.06.001. Epub 2010 Jun 9.

Abstract

Clostridium difficile is mainly associated with nosocomial infections but can be present also in other environments. In this study we compared three methods (culturing with and without ethanol shock and real-time PCR) for detection of C. difficile in water and have used them on a series of river water samples. C. difficile was present in 17 of 25 rivers tested (68.0%) and in 42 of 69 water samples tested (60.9%). Positive sampling sites correlated with increased population densities. Isolates were distributed into 34 PCR ribotypes, of which more than half are present also in humans and animals. PCR ribotype 014 was the predominate type (16.2% of all isolates).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Bacterial Typing Techniques
  • Bacteriological Techniques / methods
  • Clostridioides difficile / classification*
  • Clostridioides difficile / genetics*
  • Clostridioides difficile / growth & development
  • Clostridioides difficile / isolation & purification
  • Genetic Variation*
  • Genotype
  • Humans
  • Polymerase Chain Reaction / methods
  • Ribotyping
  • Rivers / microbiology*