Evolution of hepatitis B genotype C viral quasi-species during hepatitis B e antigen seroconversion

J Hepatol. 2011 Jan;54(1):19-25. doi: 10.1016/j.jhep.2010.06.018. Epub 2010 Aug 25.

Abstract

Background & aims: Although the evolution of viral quasi-species may be related to the pathological status of disease, little is known about this phenomenon in hepatitis B, particularly with respect to hepatitis B e antigen (HBeAg) seroconversion.

Methods: Nucleotide sequences of the hepatitis B virus (HBV) X/precore/core region was analyzed at five time-points in four groups of chronic hepatitis B patients, interferon-induced seroconverters (IS, N = 9), interferon non-responders (IN, N = 9), spontaneous seroconverters (SS, N = 9), and non-seroconverters (SN, N = 9) followed during 60 months on an average. Only patients with genotype C were studied.

Results: Analysis of 1800 nucleotide sequences showed that there was no statistical difference between the nucleotide genetic distances of seroconverters (IS and SS; 6.9 × 10⁻³ substitutions (st)/site and 6.7 × 10⁻³ st/site, respectively) and those of non-seroconverters (IN and SN; 5.3 × 10⁻³ st/site and 3.8 × 10⁻³ st/site, respectively) before seroconversion. Compared to non-seroconverters (IN and SN; 5.1 × 10⁻³ st/site and 5.9 × 10⁻³ st/site, respectively), the sequence diversity of seroconverters (IS and SS; 10.9 × 10⁻³ st/site and 9.9 × 10⁻³ st/site, respectively) was significantly higher after seroconversion (p < 0.05), and was higher in seroconverters after seroconversion than before seroconversion (p < 0.05), while this changed very little in non-seroconverters during the observation period. Phylogenetic trees showed greater complexity in secoconverters than non-seroconverters. Parsimony-based estimation of the direction of sequence change between descendants and ancestors before HBeAg seroconversion, revealed higher frequencies of transversional A to T substitution in seroconverters (0.06 vs. 0.02, p = 0.0036) that coincided with the dynamics of quasi-species possessing A1762T mutation.

Conclusions: The distinctly greater viral diversity in HBeAg seroconverters after seroconversion could be related to escape mutants resulting from stronger selection pressure.

MeSH terms

  • Adult
  • Base Sequence
  • DNA Primers / genetics
  • DNA, Viral / genetics
  • Evolution, Molecular
  • Female
  • Genetic Variation
  • Genotype
  • Hepatitis B Antibodies / blood
  • Hepatitis B e Antigens / genetics*
  • Hepatitis B e Antigens / immunology*
  • Hepatitis B virus / classification
  • Hepatitis B virus / genetics*
  • Hepatitis B virus / immunology*
  • Hepatitis B, Chronic / immunology*
  • Hepatitis B, Chronic / virology*
  • Humans
  • Male
  • Middle Aged
  • Phylogeny
  • Point Mutation
  • Promoter Regions, Genetic
  • Viral Load
  • Young Adult

Substances

  • DNA Primers
  • DNA, Viral
  • Hepatitis B Antibodies
  • Hepatitis B e Antigens