Prodynorphin promoter SNP associated with alcohol dependence forms noncanonical AP-1 binding site that may influence gene expression in human brain

Brain Res. 2011 Apr 18:1385:18-25. doi: 10.1016/j.brainres.2011.02.042. Epub 2011 Feb 19.

Abstract

Single nucleotide polymorphism (rs1997794) in promoter of the prodynorphin gene (PDYN) associated with alcohol-dependence may impact PDYN transcription in human brain. To address this hypothesis we analyzed PDYN mRNA levels in the dorsolateral prefrontal cortex (dl-PFC) and hippocampus, both involved in cognitive control of addictive behavior and PDYN promoter SNP genotype in alcohol-dependent and control human subjects. The principal component analysis suggested that PDYN expression in the dl-PFC may be related to alcoholism, while in the hippocampus may depend on the genotype. We also demonstrated that the T, low risk SNP allele resides within noncanonical AP-1-binding element that may be targeted by JUND and FOSB proteins, the dominant AP-1 constituents in the human brain. The T to C transition abrogated AP-1 binding. The impact of genetic variations on PDYN transcription may be relevant for diverse adaptive responses of this gene to alcohol.

Publication types

  • Comparative Study
  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Aged
  • Aged, 80 and over
  • Alcoholism / genetics*
  • Alcoholism / metabolism*
  • Alcoholism / pathology
  • Binding Sites / genetics
  • Enkephalins / biosynthesis
  • Enkephalins / genetics*
  • Gene Expression Regulation
  • Genotype
  • HeLa Cells
  • Hippocampus / metabolism*
  • Hippocampus / pathology
  • Humans
  • Male
  • Middle Aged
  • Polymorphism, Single Nucleotide / genetics*
  • Prefrontal Cortex / metabolism*
  • Prefrontal Cortex / pathology
  • Promoter Regions, Genetic / genetics*
  • Protein Precursors / biosynthesis
  • Protein Precursors / genetics*
  • Transcription Factor AP-1 / biosynthesis
  • Transcription Factor AP-1 / genetics
  • Transcription Factor AP-1 / metabolism*

Substances

  • Enkephalins
  • Protein Precursors
  • Transcription Factor AP-1
  • preproenkephalin