Sequence analysis of the HN gene of parainfluenza virus type 2

J Gen Virol. 1990 May:71 ( Pt 5):1163-8. doi: 10.1099/0022-1317-71-5-1163.

Abstract

A cDNA library was constructed in lambda gt10 using mRNA purified from cells infected with parainfluenza virus type 2 (PIV2). Virus-specific clones were identified by screening the library with 32P-labelled cDNA probes made from randomly primed vRNA. Clones containing the haemagglutinin-neuraminidase (HN) gene were identified by sequence comparisons with known parainfluenza virus HN gene sequences. The largest HN clone isolated had a nucleic acid sequence of 2065 bp with a single long open reading frame encoding a protein of 571 amino acids. The HN protein has nine predicted glycosylation sites and an amino-terminal membrane-spanning region. The PIV2 HN protein shares 43% amino acid identity with the HN protein of simian virus 5 and 40% with mumps virus, 30% of the amino acids being common to all three viruses.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • DNA / genetics
  • Gene Library
  • Genes, Viral
  • HN Protein / genetics*
  • Molecular Sequence Data
  • Mumps virus / genetics
  • Parainfluenza Virus 2, Human / genetics*
  • Polymerase Chain Reaction
  • RNA, Messenger / genetics
  • RNA, Viral / genetics
  • Respirovirus / genetics*
  • Sequence Homology, Nucleic Acid
  • Vero Cells

Substances

  • HN Protein
  • RNA, Messenger
  • RNA, Viral
  • DNA