A pilot analytic study of a research-level, lower-cost human papillomavirus 16, 18, and 45 test

J Virol Methods. 2011 Sep;176(1-2):112-4. doi: 10.1016/j.jviromet.2011.05.024. Epub 2011 May 27.

Abstract

The analytic performance of a low-cost, research-stage DNA test for the most carcinogenic human papillomavirus (HPV) genotypes (HPV16, HPV18, and HPV45) in aggregate was evaluated among carcinogenic HPV-positive women, which might be used to decide who needs immediate colposcopy in low-resource settings ("triage test"). We found that HPV16/18/45 test agreed well with two DNA tests, a GP5+/6+ genotyping assay (Kappa = 0.77) and a quantitative PCR assay (at a cutpoint of 5000 viral copies) (Kappa = 0.87). DNA sequencing on a subset of 16 HPV16/18/45 positive and 16 HPV16/18/45 negative verified the analytic specificity of the research test. It is concluded that the HPV16/18/45 assay is a promising triage test with a minimum detection of approximately 5000 viral copies, the clinically relevant threshold.

Publication types

  • Evaluation Study
  • Research Support, N.I.H., Intramural

MeSH terms

  • Cervix Uteri / virology
  • Colposcopy
  • DNA, Viral / analysis
  • Female
  • Human papillomavirus 16 / classification
  • Human papillomavirus 16 / genetics*
  • Human papillomavirus 16 / isolation & purification
  • Human papillomavirus 18 / classification*
  • Human papillomavirus 18 / genetics*
  • Human papillomavirus 18 / isolation & purification
  • Humans
  • Papillomavirus Infections / virology*
  • Pilot Projects
  • Polymerase Chain Reaction / methods*
  • Uterine Cervical Dysplasia / virology*
  • Uterine Cervical Neoplasms / virology*

Substances

  • DNA, Viral